STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL48058.1Amino acid adenylation domain-containing protein/natural product biosynthesis luciferase-like monooxygenase domain-containing protein. (5074 aa)    
Predicted Functional Partners:
SCL50838.1
AMP-binding enzyme.
 
 0.999
SCL52638.1
Condensation domain-containing protein.
 
 0.999
SCL54525.1
Acyl transferase domain-containing protein.
 
0.999
SCL54740.1
Polyketide synthase dehydratase.
 
 0.999
SCL54745.1
Beta-ketoacyl synthase, N-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
0.999
SCL54753.1
Malonyl CoA-acyl carrier protein transacylase.
 
0.999
SCL54839.1
Amino acid adenylation domain-containing protein.
 
0.999
SCL55426.1
Acyl transferase domain-containing protein; Belongs to the P-Pant transferase superfamily.
 
0.999
SCL55430.1
Acyl transferase domain-containing protein.
 
0.999
SCL55493.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
0.999
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.