STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL48201.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
SCL48198.1
Hypothetical protein.
       0.749
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.587
SCL65325.1
Endoglucanase.
  
 0.586
SCL65479.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
  
 0.586
SCL59712.1
Chitinase family 18; Belongs to the glycosyl hydrolase 18 family.
  
  0.564
SCL50542.1
Dephospho-CoA kinase.
    
  0.485
SCL48205.1
Hypothetical protein.
       0.456
SCL46236.1
Lysophospholipase L1.
   
  0.450
SCL47141.1
Lysophospholipase L1.
   
  0.450
SCL49769.1
Lysophospholipase L1.
   
  0.450
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.