STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL48466.1Putative Flp pilus-assembly TadE/G-like. (148 aa)    
Predicted Functional Partners:
SCL48470.1
TadE-like protein.
 
     0.949
SCL48474.1
Flp pilus assembly protein TadG.
 
     0.945
SCL48490.1
Hypothetical protein.
 
     0.932
SCL48480.1
Type II secretion system (T2SS), protein F.
 
     0.931
SCL48484.1
Flp pilus assembly protein TadB.
 
     0.931
SCL48498.1
Hypothetical protein.
 
     0.925
SCL48464.1
LysM domain-containing protein.
 
     0.924
SCL48495.1
SAF domain-containing protein.
 
     0.919
SCL48500.1
Hypothetical protein; Manually curated.
 
     0.912
SCL48488.1
Pilus assembly protein, ATPase of CpaF family.
 
     0.781
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.