STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL48527.1Dnd system-associated protein 4. (155 aa)    
Predicted Functional Partners:
SCL48522.1
DNA sulfur modification protein DndD.
 
     0.952
SCL48515.1
Superfamily II DNA or RNA helicase.
 
     0.895
SCL48546.1
DNA sulfur modification protein DndD.
 
     0.798
SCL48539.1
DNA sulfur modification protein DndC.
  
     0.774
SCL48549.1
DNA sulfur modification protein DndE.
  
     0.774
SCL48552.1
DNA phosphorothioation-associated putative methyltransferase.
  
     0.774
SCL48518.1
Hypothetical protein.
       0.773
SCL54788.1
Hypothetical protein.
  
     0.767
SCL48534.1
DNA sulfur modification protein DndB; Manually curated.
  
     0.741
SCL54884.1
Hypothetical protein.
  
     0.651
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.