STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL48656.1Amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3). (497 aa)    
Predicted Functional Partners:
SCL48660.1
Golgi phosphoprotein 3 (GPP34).
 
     0.851
SCL48649.1
Acetyltransferase (GNAT) family protein.
 
     0.832
SCL48652.1
Acetyltransferase (GNAT) family protein.
 
     0.805
SCL49309.1
Alpha-glucosidase.
   
  0.779
SCL49326.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 13 family.
   
  0.779
glgE
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
   
  0.779
SCL60643.1
Alpha-amylase.
   
  0.779
SCL61854.1
Alpha-glucosidase; Non-canonical start codon; manually curated.
   
  0.779
SCL62277.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
   
  0.779
nadE
NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.645
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.