STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL48749.1Replication-relaxation. (304 aa)    
Predicted Functional Partners:
SCL48374.1
DNA helicase HerA, contains HAS-barrel and ATPase domains.
 
     0.788
SCL48742.1
AAA-like domain-containing protein.
 
     0.787
SCL48367.1
PrgI family protein.
 
     0.778
SCL48735.1
PrgI family protein.
 
     0.778
SCL48360.1
Hypothetical protein.
 
     0.777
SCL48729.1
Hypothetical protein.
 
     0.777
SCL48354.1
Hypothetical protein.
  
     0.774
SCL48721.1
Hypothetical protein.
  
     0.774
SCL48364.1
Hypothetical protein.
  
     0.773
SCL48731.1
Hypothetical protein.
  
     0.773
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.