STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL49519.1Type VII secretion-associated serine protease mycosin; Manually curated. (388 aa)    
Predicted Functional Partners:
SCL49522.1
Hypothetical protein.
  
 
  0.828
SCL49525.1
Hypothetical protein.
       0.778
SCL57933.1
Subtilase family protein.
  
     0.762
SCL63563.1
Serine protease, subtilisin family.
  
     0.760
SCL49512.1
caffeoyl-CoA O-methyltransferase.
  
    0.719
SCL49515.1
Septum formation protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.714
SCL64993.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.642
SCL58086.1
Alpha-tubulin suppressor.
   
 0.611
SCL48115.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.548
SCL49529.1
Acyl-CoA carboxylase epsilon subunit.
       0.548
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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