STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL49655.1Multicopper oxidase. (392 aa)    
Predicted Functional Partners:
SCL49645.1
PKD domain-containing protein.
 
     0.916
SCL49659.1
Chitobiase/beta-hexosaminidase C-terminal domain-containing protein.
 
    0.898
SCL47796.1
Cysteine synthase A.
  
  
 0.848
SCL47790.1
Predicted arabinose efflux permease, MFS family.
  
  
 0.824
SCL65499.1
Two-component system, OmpR family, sensor histidine kinase BaeS.
  
 
 0.751
SCL65946.1
Two-component system, OmpR family, sensor histidine kinase BaeS.
  
 
 0.751
SCL66058.1
Signal transduction histidine kinase.
  
 
 0.751
SCL66061.1
Protein of unknown function.
  
 
 0.751
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
   
 
 0.717
SCL61704.1
Heme oxygenase.
    
 0.706
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.