STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL49745.1MoxR-like ATPase. (333 aa)    
Predicted Functional Partners:
SCL49742.1
Hypothetical protein.
       0.850
SCL49738.1
Protein of unknown function.
       0.843
SCL49736.1
uracil-DNA glycosylase, family 4.
       0.718
SCL49749.1
Hypothetical protein.
       0.549
SCL58583.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
  
 0.532
SCL59607.1
Transglutaminase-like superfamily protein.
 
     0.502
SCL49734.1
Carboxymethylenebutenolidase.
       0.483
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
 0.435
SCL58887.1
Protein of unknown function DUF58.
  
 0.435
SCL51218.1
Erythromycin resistance leader peptide.
  
 0.429
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
Server load: low (22%) [HD]