Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SCL49976.1 | SCL49979.1 | GA0070617_1344 | GA0070617_1345 | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | Hypothetical protein. | 0.803 |
| SCL49976.1 | SCL49982.1 | GA0070617_1344 | GA0070617_1346 | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | Hypothetical protein. | 0.891 |
| SCL49976.1 | SCL49985.1 | GA0070617_1344 | GA0070617_1347 | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | Hypothetical protein. | 0.738 |
| SCL49976.1 | SCL53261.1 | GA0070617_1344 | GA0070617_2317 | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | Hypothetical protein. | 0.557 |
| SCL49976.1 | SCL55574.1 | GA0070617_1344 | GA0070617_2996 | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | Hypothetical protein. | 0.686 |
| SCL49976.1 | SCL55582.1 | GA0070617_1344 | GA0070617_2998 | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | VWA domain containing CoxE-like protein. | 0.672 |
| SCL49976.1 | SCL55584.1 | GA0070617_1344 | GA0070617_2999 | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | Hypothetical protein. | 0.750 |
| SCL49976.1 | SCL55588.1 | GA0070617_1344 | GA0070617_3000 | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | Hypothetical protein. | 0.745 |
| SCL49976.1 | SCL61076.1 | GA0070617_1344 | GA0070617_4561 | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | Hypothetical protein. | 0.555 |
| SCL49976.1 | recR | GA0070617_1344 | GA0070617_5703 | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.822 |
| SCL49979.1 | SCL49976.1 | GA0070617_1345 | GA0070617_1344 | Hypothetical protein. | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.803 |
| SCL49979.1 | SCL49982.1 | GA0070617_1345 | GA0070617_1346 | Hypothetical protein. | Hypothetical protein. | 0.725 |
| SCL49979.1 | SCL49985.1 | GA0070617_1345 | GA0070617_1347 | Hypothetical protein. | Hypothetical protein. | 0.725 |
| SCL49982.1 | SCL49976.1 | GA0070617_1346 | GA0070617_1344 | Hypothetical protein. | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.891 |
| SCL49982.1 | SCL49979.1 | GA0070617_1346 | GA0070617_1345 | Hypothetical protein. | Hypothetical protein. | 0.725 |
| SCL49982.1 | SCL49985.1 | GA0070617_1346 | GA0070617_1347 | Hypothetical protein. | Hypothetical protein. | 0.775 |
| SCL49982.1 | SCL53261.1 | GA0070617_1346 | GA0070617_2317 | Hypothetical protein. | Hypothetical protein. | 0.415 |
| SCL49985.1 | SCL49976.1 | GA0070617_1347 | GA0070617_1344 | Hypothetical protein. | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.738 |
| SCL49985.1 | SCL49979.1 | GA0070617_1347 | GA0070617_1345 | Hypothetical protein. | Hypothetical protein. | 0.725 |
| SCL49985.1 | SCL49982.1 | GA0070617_1347 | GA0070617_1346 | Hypothetical protein. | Hypothetical protein. | 0.775 |
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