STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL50497.1Methylamine utilisation protein MauE. (174 aa)    
Predicted Functional Partners:
SCL50495.1
Thioredoxin.
     0.904
SCL50491.1
Hypothetical protein.
   
 
 0.864
SCL50501.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.745
SCL46205.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC.
  
 0.610
SCL50504.1
Copper transport protein.
     
 0.534
SCL60714.1
Hypothetical protein.
   
    0.467
SCL61718.1
Hypothetical protein.
   
    0.467
SCL61720.1
Htaa protein.
   
    0.467
SCL48592.1
Thioredoxin reductase.
  
   0.425
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.