STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL51079.1Cellobiose transport system permease protein. (309 aa)    
Predicted Functional Partners:
SCL51084.1
Cellobiose transport system permease protein.
 0.994
SCL64692.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  0.987
SCL51076.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-).
 
  0.985
SCL47679.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.983
SCL58646.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  0.982
SCL52276.1
Cellobiose ABC transporter membrane protein.
 0.973
SCL49322.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.953
SCL52262.1
Cellobiose-binding protein.
 
  0.934
SCL54909.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.928
SCL57884.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.928
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.