STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL51837.1Hemolysin, contains CBS domains. (452 aa)    
Predicted Functional Partners:
SCL51841.1
Hemolysin, contains CBS domains.
 
   
0.834
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.737
SCL65421.1
Hemolysin, contains CBS domains.
 
   
0.613
SCL51845.1
Sporulation-control protein spo0M.
       0.486
SCL51818.1
Multisubunit sodium/proton antiporter, MrpA subunit /multisubunit sodium/proton antiporter, MrpB subunit.
       0.475
SCL51823.1
Multisubunit sodium/proton antiporter, MrpC subunit.
  
    0.469
SCL51824.1
Multisubunit sodium/proton antiporter, MrpD subunit.
       0.465
SCL51828.1
Multisubunit sodium/proton antiporter, MrpE subunit (TC 2.A.63.1).
       0.465
SCL51831.1
Multisubunit sodium/proton antiporter, MrpF subunit.
       0.465
SCL51834.1
Multisubunit sodium/proton antiporter, MrpG subunit.
       0.465
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.