STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL51913.1Amino acid ABC transporter ATP-binding protein, PAAT family. (248 aa)    
Predicted Functional Partners:
SCL51903.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.999
SCL51906.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 0.999
SCL51910.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
 0.982
SCL62322.1
Amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-).
 
 0.974
SCL62327.1
Polar amino acid transport system permease protein.
 0.974
SCL53945.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.958
SCL65057.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.958
SCL53947.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.861
SCL64930.1
Hypothetical protein.
  
 0.814
SCL62317.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.720
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.