STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL52004.1iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (343 aa)    
Predicted Functional Partners:
SCL52008.1
iron(III) transport system permease protein.
 
 0.987
SCL52010.1
iron(III) transport system substrate-binding protein.
 
 
 0.971
SCL60430.1
iron(III) transport system permease protein.
 
 
 0.904
SCL60436.1
iron(III) transport system substrate-binding protein.
 
 
 0.815
SCL58003.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 0.788
SCL60433.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  
 
0.768
SCL58008.1
Molybdate transport system substrate-binding protein.
   
 0.669
SCL64884.1
Osmoprotectant transport system substrate-binding protein.
  
 
  0.578
SCL47679.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
0.559
SCL64692.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 
 
0.559
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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