STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL52053.1Dual-action HEIGH metallo-peptidase. (176 aa)    
Predicted Functional Partners:
SCL64411.1
PAP2 superfamily protein.
  
     0.633
SCL64391.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.612
SCL63667.1
Hypothetical protein.
  
     0.605
SCL65992.1
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.604
SCL47630.1
Protein of unknown function.
  
     0.602
SCL51785.1
Hypothetical protein.
  
     0.590
SCL65075.1
Adenylate and Guanylate cyclase catalytic domain-containing protein.
  
     0.584
SCL56629.1
Hypothetical protein.
  
     0.578
SCL64745.1
RDD family protein.
  
     0.565
SCL49044.1
Hypothetical protein.
  
     0.547
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
Server load: low (34%) [HD]