SCL52187.1 protein (Micromonospora yangpuensis)

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SCL52187.1

Ribosomal protein L7/L12 C-terminal domain-containing protein. (97 aa)

Predicted Functional Partners:

rpsB

0.985

rpsJ

0.985

rpmF

0.983

rplQ

0.982

rplP

0.982

rplI

0.981

rplT

0.981

rplU

0.981

rplO

0.981

rplB

0.981

Your Current Organism:

Micromonospora yangpuensis

NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCL52187.1	rplB	GA0070617_2001	GA0070617_5197	Ribosomal protein L7/L12 C-terminal domain-containing protein.	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.981
SCL52187.1	rplI	GA0070617_2001	GA0070617_0095	Ribosomal protein L7/L12 C-terminal domain-containing protein.	LSU ribosomal protein L9P; Binds to the 23S rRNA.	0.981
SCL52187.1	rplO	GA0070617_2001	GA0070617_5181	Ribosomal protein L7/L12 C-terminal domain-containing protein.	LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.981
SCL52187.1	rplP	GA0070617_2001	GA0070617_5193	Ribosomal protein L7/L12 C-terminal domain-containing protein.	LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.982
SCL52187.1	rplQ	GA0070617_2001	GA0070617_5170	Ribosomal protein L7/L12 C-terminal domain-containing protein.	LSU ribosomal protein L17P.	0.982
SCL52187.1	rplT	GA0070617_2001	GA0070617_2528	Ribosomal protein L7/L12 C-terminal domain-containing protein.	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.981
SCL52187.1	rplU	GA0070617_2001	GA0070617_4650	Ribosomal protein L7/L12 C-terminal domain-containing protein.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.981
SCL52187.1	rpmF	GA0070617_2001	GA0070617_1755	Ribosomal protein L7/L12 C-terminal domain-containing protein.	Large subunit ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.983
SCL52187.1	rpsB	GA0070617_2001	GA0070617_1792	Ribosomal protein L7/L12 C-terminal domain-containing protein.	SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.	0.985
SCL52187.1	rpsJ	GA0070617_2001	GA0070617_5201	Ribosomal protein L7/L12 C-terminal domain-containing protein.	SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.985
rplB	SCL52187.1	GA0070617_5197	GA0070617_2001	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Ribosomal protein L7/L12 C-terminal domain-containing protein.	0.981
rplB	rplI	GA0070617_5197	GA0070617_0095	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	LSU ribosomal protein L9P; Binds to the 23S rRNA.	0.996
rplB	rplO	GA0070617_5197	GA0070617_5181	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.999
rplB	rplP	GA0070617_5197	GA0070617_5193	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.999
rplB	rplQ	GA0070617_5197	GA0070617_5170	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	LSU ribosomal protein L17P.	0.998
rplB	rplT	GA0070617_5197	GA0070617_2528	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.998
rplB	rplU	GA0070617_5197	GA0070617_4650	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.996
rplB	rpmF	GA0070617_5197	GA0070617_1755	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Large subunit ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.991
rplB	rpsB	GA0070617_5197	GA0070617_1792	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.	0.997
rplB	rpsJ	GA0070617_5197	GA0070617_5201	LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999

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