STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL52644.1ATP-grasp domain-containing protein. (498 aa)    
Predicted Functional Partners:
accA
acetyl-CoA carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
 0.993
SCL60395.1
[acyl-carrier-protein] S-malonyltransferase.
  
 0.980
SCL52641.1
3-oxoacyl-[acyl-carrier-protein] synthase-3.
 
 
  0.944
SCL52648.1
Diaminopimelate decarboxylase.
 
     0.913
SCL46268.1
Acetyl-CoA carboxylase, carboxyltransferase component.
  
  0.887
SCL49553.1
propionyl-CoA carboxylase carboxyltransferase subunit.
  
  0.887
SCL52843.1
acetyl-CoA carboxylase carboxyltransferase subunit beta /acetyl-CoA carboxylase carboxyltransferase subunit alpha.
  
  0.887
SCL60405.1
acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit.
  
  0.887
SCL65036.1
Acetyl-CoA carboxylase, carboxyltransferase component.
  
  0.887
SCL54753.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.884
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.