STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL52729.1L-glutamine synthetase. (499 aa)    
Predicted Functional Partners:
SCL59368.1
Glutamate synthase (NADH) large subunit.
  
 
 0.947
SCL59365.1
Glutamate synthase (NADH) small subunit.
  
 
 0.853
SCL49315.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
    
   0.818
SCL52731.1
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family.
 
   
 0.816
SCL61947.1
Glutamate dehydrogenase.
     
 0.765
SCL63235.1
Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
 0.765
SCL55430.1
Acyl transferase domain-containing protein.
    
 0.764
SCL60029.1
Glutamine synthetase.
 
  
 
0.757
SCL60101.1
Glutamine synthetase.
  
  
 
0.752
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
 
 
 0.751
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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