STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL52799.1Bifunctional hydroxylase/dehydrase. (494 aa)    
Predicted Functional Partners:
SCL56060.1
Thioesterase domain-containing protein.
 
 0.658
SCL52797.1
Antibiotic biosynthesis monooxygenase.
       0.642
SCL52813.1
Cyclase.
 
  
  0.626
SCL58046.1
Acyl transferase domain-containing protein.
 
 0.536
SCL47139.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
     
 0.527
SCL57800.1
Ferredoxin-NADP reductase.
     
 0.527
SCL52793.1
Cupin domain-containing protein.
       0.524
SCL65529.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.522
SCL49782.1
Dioxygenase.
 
  
 0.518
SCL52880.1
Cytochrome P450.
  
  0.506
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
Server load: low (22%) [HD]