STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL53096.1CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase. (587 aa)    
Predicted Functional Partners:
ispD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).
 
  
 0.816
SCL53016.1
Polysaccharide pyruvyl transferase.
 
     0.755
SCL55524.1
Zinc carboxypeptidase.
  
     0.634
SCL65985.1
Choline kinase.
 
  
 0.623
SCL47863.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.579
SCL55479.1
Sulfotransferase family protein.
  
     0.519
SCL61920.1
Hypothetical protein.
  
     0.505
SCL52192.1
FtsX-like permease family protein.
  
     0.502
SCL50982.1
Acetyltransferase (GNAT) domain-containing protein.
  
     0.492
SCL53724.1
dTDP-4-dehydrorhamnose reductase.
 
  
 0.481
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.