STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL53477.1beta-N-acetylhexosaminidase. (502 aa)    
Predicted Functional Partners:
SCL50250.1
CubicO group peptidase, beta-lactamase class C family.
 
  0.941
SCL60449.1
beta-N-acetylhexosaminidase.
  
  
 
0.891
SCL50925.1
beta-N-acetylhexosaminidase.
  
  
 
0.870
SCL61131.1
Hexosaminidase.
    
 0.868
SCL59712.1
Chitinase family 18; Belongs to the glycosyl hydrolase 18 family.
  
 
 0.858
SCL65325.1
Endoglucanase.
    
 0.540
SCL65479.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
    
 0.540
SCL61243.1
Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains.
    
 0.534
SCL62423.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
    
 0.527
SCL64404.1
N-acetylglucosamine 6-phosphate deacetylase.
 
  
 0.515
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.