STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL53947.1Amino acid ABC transporter substrate-binding protein, PAAT family. (287 aa)    
Predicted Functional Partners:
SCL53940.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.998
SCL53945.1
Amino acid ABC transporter membrane protein, PAAT family.
 
  0.984
SCL51906.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 0.974
SCL51903.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.912
SCL51913.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.861
SCL62332.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.794
SCL46951.1
Signal transduction histidine kinase.
    
 0.733
SCL51622.1
Signal transduction histidine kinase.
    
 0.687
SCL62916.1
Sulfate adenylyltransferase.
   
 
 0.681
SCL62322.1
Amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-).
 
  0.652
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.