STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL54289.1Adenylate cyclase, class 2. (245 aa)    
Predicted Functional Partners:
moaA
Cyclic pyranopterin monophosphate synthase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
    
  0.663
SCL64684.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.661
SCL56636.1
Adenylate cyclase, class 3.
     
 0.655
SCL65075.1
Adenylate and Guanylate cyclase catalytic domain-containing protein.
     
 0.655
SCL48692.1
Helix-turn-helix domain-containing protein.
  
     0.622
SCL48288.1
Exonuclease III.
  
     0.565
SCL48294.1
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein.
  
  
  0.540
SCL47817.1
Helix-turn-helix.
  
     0.531
SCL59718.1
Tetratricopeptide repeat-containing protein.
  
     0.493
SCL47330.1
Helix-turn-helix domain-containing protein.
  
     0.465
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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