STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL54466.1DNA-binding transcriptional activator of the SARP family. (273 aa)    
Predicted Functional Partners:
SCL46118.1
Predicted ATPase.
 
    0.863
fbiD
2-phospho-L-lactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
  
     0.535
SCL59338.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
     0.500
SCL54343.1
2-phospho-L-lactate guanylyltransferase.
  
     0.498
SCL59223.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
   
    0.481
SCL63851.1
Predicted ATPase.
    0.469
SCL51640.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
     0.449
SCL50825.1
Transcriptional regulatory protein, C terminal.
  
     0.415
SCL50089.1
Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
  
    0.403
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.