STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL54794.1Aryl-phospho-beta-D-glucosidase BglC, GH1 family; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (488 aa)    
Predicted Functional Partners:
SCL49891.1
Hypothetical protein.
   
  0.935
SCL61926.1
Cellulase/cellobiase CelA1; Belongs to the glycosyl hydrolase family 6.
  
 
  0.743
SCL56188.1
Exo-1,4-beta-glucosidase.
 
  
 0.716
SCL59712.1
Chitinase family 18; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.671
SCL47036.1
Terpene synthase family, metal binding domain.
  
     0.669
SCL53378.1
Endoglucanase; Belongs to the glycosyl hydrolase family 6.
   
 
  0.661
SCL54798.1
3-dehydroquinate synthase.
       0.658
SCL47922.1
Beta-glucosidase.
 
  
 0.654
SCL60480.1
Cellulose binding domain-containing protein.
  
     0.640
SCL52295.1
Processive endocellulase.
  
 
  0.629
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.