Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SCL54996.1Fumarate reductase flavoprotein subunit. (477 aa)    
Predicted Functional Partners:
SCL62402.1
2-oxoglutarate dehydrogenase E1 component.
  
 0.959
SCL64731.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.957
SCL53237.1
Succinate dehydrogenase subunit B.
  
 0.906
SCL62812.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
  
 0.906
SCL53241.1
Succinate dehydrogenase / fumarate reductase cytochrome b subunit; Manually curated.
  
 0.870
SCL47229.1
NADH dehydrogenase subunit G.
  
 
 0.833
SCL52894.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
  
 0.831
SCL59874.1
Menaquinol-cytochrome c reductase iron-sulfur subunit precursor.
  
 0.831
SCL47139.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.825
SCL60529.1
NADH:ubiquinone oxidoreductase, NADH-binding subunit (chain F).
  
 
 0.821
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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