STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL55118.1Ribose transport system ATP-binding protein. (494 aa)    
Predicted Functional Partners:
SCL55121.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.978
SCL55126.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
  0.977
SCL55131.1
Ribose transport system substrate-binding protein.
 
 0.953
SCL61052.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.951
SCL55558.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.945
SCL55555.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.939
SCL48027.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.927
SCL58142.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
  0.925
SCL55097.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
     
  0.900
SCL55098.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
     
  0.900
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.