STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL55171.1Alpha-galactosidase. (545 aa)    
Predicted Functional Partners:
SCL55167.1
alpha-L-fucosidase 2.
 
    
0.745
SCL59712.1
Chitinase family 18; Belongs to the glycosyl hydrolase 18 family.
  
  
  0.701
SCL47649.1
Aldose 1-epimerase.
  
 
  0.692
SCL49309.1
Alpha-glucosidase.
   
 
 0.689
SCL61854.1
Alpha-glucosidase; Non-canonical start codon; manually curated.
   
 
 0.689
SCL49326.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 13 family.
   
 
 0.682
SCL52206.1
Alpha-galactosidase.
  
  
 
0.674
SCL55165.1
Poly(3-hydroxybutyrate) depolymerase.
 
    
0.672
SCL52451.1
Ricin-type beta-trefoil lectin domain-like.
   
 0.661
SCL54235.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.652
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.