STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL55272.1acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)    
Predicted Functional Partners:
SCL55267.1
3-hydroxy-3-methylglutaryl CoA synthase.
 
 0.999
SCL52125.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.995
SCL55247.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase.
 
  0.935
SCL46724.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.931
SCL62042.1
3-hydroxybutyryl-CoA dehydrogenase.
  
 0.931
SCL62001.1
3-hydroxybutyryl-CoA dehydrogenase.
 
 0.927
SCL55275.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  0.912
SCL55318.1
Enoyl-CoA hydratase/carnithine racemase.
 
 0.899
SCL49008.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.880
SCL56060.1
Thioesterase domain-containing protein.
  
 
 0.846
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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