STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL55912.1Aminocarboxymuconate-semialdehyde decarboxylase. (364 aa)    
Predicted Functional Partners:
SCL56441.1
Aminocarboxymuconate-semialdehyde decarboxylase.
  
     0.774
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
 
  
 0.745
SCL60879.1
Regulator of RNase E activity RraA.
    
 0.644
SCL55910.1
Benzoylformate decarboxylase.
 
     0.634
SCL47139.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
  0.615
SCL57800.1
Ferredoxin-NADP reductase.
    
  0.615
SCL55925.1
Fumarate reductase flavoprotein subunit.
 
     0.588
SCL55922.1
Aminocarboxymuconate-semialdehyde decarboxylase.
 
    
0.585
SCL55908.1
Phosphoenolpyruvate mutase.
  
    0.580
SCL55905.1
Phosphoglycerate dehydrogenase.
       0.543
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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