STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL56122.1Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family. (64 aa)    
Predicted Functional Partners:
SCL46397.1
PPOX class probable F420-dependent enzyme.
  
    0.490
SCL47508.1
PPOX class probable F420-dependent enzyme.
  
    0.490
SCL47702.1
PPOX class probable F420-dependent enzyme.
  
    0.490
SCL50287.1
PPOX class probable F420-dependent enzyme.
  
    0.490
SCL52803.1
PPOX class probable F420-dependent enzyme.
  
    0.490
SCL59771.1
General stress protein 26.
  
    0.490
SCL46715.1
Hypothetical protein.
  
    0.486
SCL47097.1
ABC-2 type transport system permease protein.
 
    0.477
SCL50294.1
Hypothetical protein.
   
    0.477
SCL53107.1
Putative NADH-flavin reductase.
   
    0.477
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.