STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL56240.1Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein. (471 aa)    
Predicted Functional Partners:
SCL56244.1
Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein.
 
 0.999
SCL49391.1
ATP-binding cassette, subfamily C, CydC.
 
  
 0.965
SCL49393.1
ATP-binding cassette, subfamily C, CydD.
 
   
 0.771
SCL53239.1
Succinate dehydrogenase subunit A.
     
 0.672
SCL62811.1
Succinate dehydrogenase / fumarate reductase flavoprotein subunit.
     
 0.672
SCL53237.1
Succinate dehydrogenase subunit B.
     
 0.620
SCL62812.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
     
 0.620
SCL56247.1
Organic hydroperoxide reductase OsmC/OhrA.
       0.619
SCL63933.1
L-proline dehydrogenase.
   
 
 0.569
SCL59871.1
Menaquinol-cytochrome c reductase cytochrome b subunit precursor.
     
 0.554
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.