STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL57024.1Uncharacterized conserved protein, DUF2267 family. (142 aa)    
Predicted Functional Partners:
SCL50285.1
Hypothetical protein.
  
     0.690
SCL45933.1
Predicted phosphoribosyltransferase.
     0.638
SCL57098.1
Hypothetical protein.
  
     0.599
SCL57018.1
Cupin superfamily protein.
       0.501
SCL57021.1
Hypothetical protein.
       0.501
SCL65252.1
Hypothetical protein.
  
     0.469
SCL50049.1
Hypothetical protein.
  
     0.441
SCL57027.1
Transcriptional regulator, TraR/DksA family.
       0.422
SCL47692.1
Dienelactone hydrolase.
 
     0.401
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.