STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL57082.1Anti-anti-sigma factor. (242 aa)    
Predicted Functional Partners:
SCL51622.1
Signal transduction histidine kinase.
 
 
 0.767
SCL57214.1
Anti-anti-sigma factor.
 
 
 0.744
SCL46957.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
   0.737
SCL46920.1
Response regulator receiver domain-containing protein.
 
 0.734
SCL48317.1
Golgi phosphoprotein 3 (GPP34).
  
   0.686
SCL63793.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
   0.682
SCL56103.1
MEDS: MEthanogen/methylotroph, DcmR Sensory domain.
  
   0.681
SCL57212.1
Anti-anti-sigma factor.
  
   0.680
SCL57088.1
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
       0.672
SCL57199.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
   0.663
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.