STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL57230.1Uncharacterized conserved protein, DUF2267 family. (136 aa)    
Predicted Functional Partners:
SCL57098.1
Hypothetical protein.
  
     0.616
SCL62648.1
Helix-turn-helix domain-containing protein.
  
     0.500
SCL47494.1
Glutathione-independent formaldehyde dehydrogenase.
  
     0.470
SCL60013.1
Hypothetical protein.
  
     0.443
SCL47469.1
Uncharacterized membrane protein.
  
     0.427
SCL51563.1
Helix-turn-helix domain-containing protein.
  
     0.425
SCL53281.1
Hypothetical protein.
  
     0.414
SCL54955.1
Cupin domain-containing protein.
  
     0.410
SCL57224.1
Integral membrane protein, TerC family.
       0.410
SCL47692.1
Dienelactone hydrolase.
 
     0.407
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.