STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL57253.1S-(hydroxymethyl)mycothiol dehydrogenase. (361 aa)    
Predicted Functional Partners:
SCL54209.1
Alcohol dehydrogenase, class IV.
   
 0.977
SCL57692.1
S-formylglutathione hydrolase FrmB.
 
 0.949
SCL57249.1
Glyoxylase, beta-lactamase superfamily II.
 
    0.932
SCL52915.1
Alcohol dehydrogenase, propanol-preferring.
  
 
0.929
SCL47741.1
DNA-binding transcriptional regulator, FrmR family.
  
  
 0.773
tadA
tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
 
  0.713
SCL60913.1
Sulfoacetaldehyde dehydrogenase.
  
  0.690
SCL60495.1
Threonine dehydrogenase.
  
 
 
0.659
SCL57750.1
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
  
 
  0.648
SCL53234.1
Threonine dehydrogenase.
  
 
 
0.645
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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