STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL57274.1ABC transporter. (209 aa)    
Predicted Functional Partners:
SCL57282.1
Alpha-glucoside transport system permease protein.
    
 0.817
SCL57277.1
Alpha-glucoside transport system substrate-binding protein.
  
    0.775
SCL56433.1
ABC-2 type transport system ATP-binding protein.
  
  
  0.742
ssuB
Sulfonate transport system ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
  
  
  0.727
SCL55735.1
NitT/TauT family transport system ATP-binding protein.
  
  
  0.724
SCL54428.1
Taurine transport system ATP-binding protein.
  
  
  0.722
SCL51646.1
Putative ABC transport system ATP-binding protein.
  
 
  0.708
SCL56447.1
NitT/TauT family transport system ATP-binding protein.
  
  
  0.687
SCL54303.1
NitT/TauT family transport system ATP-binding protein.
  
  
  0.680
SCL65485.1
Putative ABC transport system ATP-binding protein.
  
 
  0.675
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.