STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL57466.1Regulatory protein, gntR family. (78 aa)    
Predicted Functional Partners:
SCL63804.1
GntR family transcriptional regulator.
  
     0.692
SCL59223.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
   
    0.606
SCL56940.1
Transcriptional regulator, GntR family.
  
     0.568
SCL49849.1
Regulatory protein, gntR family.
  
     0.536
SCL47531.1
Regulatory protein, gntR family.
  
     0.516
SCL52961.1
Transcriptional regulator, GntR family.
  
     0.498
SCL57469.1
Hypothetical protein.
       0.495
SCL48183.1
Transcriptional regulator, GntR family.
  
     0.476
SCL49731.1
Transcriptional regulator, GntR family.
  
    0.472
SCL61675.1
Regulatory protein, gntR family.
  
     0.467
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.