Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SCL45950.1 | SCL47411.1 | GA0070617_0097 | GA0070617_0572 | Single-strand binding protein. | DNA polymerase-3 subunit delta'. | 0.941 |
| SCL45950.1 | SCL57502.1 | GA0070617_0097 | GA0070617_3544 | Single-strand binding protein. | Hypothetical protein. | 0.783 |
| SCL45950.1 | SCL61640.1 | GA0070617_0097 | GA0070617_4723 | Single-strand binding protein. | Single-strand DNA-binding protein. | 0.872 |
| SCL45950.1 | SCL62637.1 | GA0070617_0097 | GA0070617_4980 | Single-strand binding protein. | ATP-dependent DNA helicase, Rep family; Manually curated. | 0.634 |
| SCL45950.1 | polA | GA0070617_0097 | GA0070617_4051 | Single-strand binding protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.556 |
| SCL45950.1 | topA | GA0070617_0097 | GA0070617_0567 | Single-strand binding protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.765 |
| SCL47411.1 | SCL45950.1 | GA0070617_0572 | GA0070617_0097 | DNA polymerase-3 subunit delta'. | Single-strand binding protein. | 0.941 |
| SCL47411.1 | SCL57497.1 | GA0070617_0572 | GA0070617_3542 | DNA polymerase-3 subunit delta'. | DNA polymerase-3 subunit epsilon. | 0.953 |
| SCL47411.1 | SCL57502.1 | GA0070617_0572 | GA0070617_3544 | DNA polymerase-3 subunit delta'. | Hypothetical protein. | 0.505 |
| SCL47411.1 | SCL61640.1 | GA0070617_0572 | GA0070617_4723 | DNA polymerase-3 subunit delta'. | Single-strand DNA-binding protein. | 0.952 |
| SCL47411.1 | SCL62637.1 | GA0070617_0572 | GA0070617_4980 | DNA polymerase-3 subunit delta'. | ATP-dependent DNA helicase, Rep family; Manually curated. | 0.560 |
| SCL47411.1 | polA | GA0070617_0572 | GA0070617_4051 | DNA polymerase-3 subunit delta'. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.508 |
| SCL47411.1 | topA | GA0070617_0572 | GA0070617_0567 | DNA polymerase-3 subunit delta'. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.480 |
| SCL48984.1 | SCL57502.1 | GA0070617_1045 | GA0070617_3544 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Hypothetical protein. | 0.701 |
| SCL48984.1 | topA | GA0070617_1045 | GA0070617_0567 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.839 |
| SCL57497.1 | SCL47411.1 | GA0070617_3542 | GA0070617_0572 | DNA polymerase-3 subunit epsilon. | DNA polymerase-3 subunit delta'. | 0.953 |
| SCL57497.1 | SCL57502.1 | GA0070617_3542 | GA0070617_3544 | DNA polymerase-3 subunit epsilon. | Hypothetical protein. | 0.531 |
| SCL57497.1 | SCL62637.1 | GA0070617_3542 | GA0070617_4980 | DNA polymerase-3 subunit epsilon. | ATP-dependent DNA helicase, Rep family; Manually curated. | 0.686 |
| SCL57497.1 | polA | GA0070617_3542 | GA0070617_4051 | DNA polymerase-3 subunit epsilon. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.637 |
| SCL57502.1 | SCL45950.1 | GA0070617_3544 | GA0070617_0097 | Hypothetical protein. | Single-strand binding protein. | 0.783 |
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