STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL57552.1Hypothetical protein. (194 aa)    
Predicted Functional Partners:
SCL57531.1
Hypothetical protein.
 
     0.794
SCL57527.1
Repeat domain-containing protein.
 
     0.791
SCL57524.1
Protein of unknown function.
 
     0.789
SCL57538.1
Enediyne biosynthesis thioesterase.
  
     0.773
SCL57556.1
Hypothetical protein.
       0.773
SCL57535.1
Enediyne polyketide synthase.
  
     0.760
SCL57548.1
Ubiquinone biosynthesis protein.
 
     0.666
SCL55724.1
NitT/TauT family transport system substrate-binding protein.
  
     0.595
SCL65431.1
Hypothetical protein.
  
     0.590
SCL59335.1
Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist.
  
     0.580
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.