STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL57668.1NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. (273 aa)    
Predicted Functional Partners:
SCL57671.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
       0.790
SCL57681.1
Peptidase propeptide and YPEB domain-containing protein.
       0.774
SCL57664.1
Predicted amidohydrolase.
       0.773
SCL57675.1
WD40 repeat.
       0.773
SCL57679.1
Hypothetical protein.
       0.773
SCL56060.1
Thioesterase domain-containing protein.
  
 
 0.750
SCL48058.1
Amino acid adenylation domain-containing protein/natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
  
 
 0.721
SCL56026.1
Phosphopantetheine attachment site.
  
 
 0.721
SCL65529.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
    
  0.688
SCL65553.1
Amino acid adenylation domain-containing protein.
  
 
  0.675
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.