STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL58149.13-(3-hydroxy-phenyl)propionate hydroxylase. (418 aa)    
Predicted Functional Partners:
SCL58152.1
Nicotinamidase-related amidase.
 
     0.859
SCL58160.1
2,3-dimethylmalate lyase.
  
    0.757
SCL58131.1
Maleate isomerase.
 
   
 0.735
SCL58155.1
Alcohol dehydrogenase.
  
    0.733
leuC-2
3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
       0.727
leuD-2
3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.
       0.727
SCL56060.1
Thioesterase domain-containing protein.
  
 0.610
SCL50353.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
     0.529
SCL47139.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
     
 0.527
SCL57800.1
Ferredoxin-NADP reductase.
     
 0.527
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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