STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL58531.1NAD binding domain of 6-phosphogluconate dehydrogenase. (44 aa)    
Predicted Functional Partners:
SCL58535.1
enoyl-CoA hydratase.
 
 
 0.890
SCL54699.1
4-carboxymuconolactone decarboxylase.
  
 
 0.789
SCL52125.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.780
SCL51987.1
Acyl-CoA synthetase (NDP forming).
    
  0.710
SCL62430.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.689
SCL48984.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.688
SCL58553.1
2-methylcitrate dehydratase.
 
 
  0.661
SCL58546.1
Citrate synthase; Belongs to the citrate synthase family.
  
 
  0.633
SCL59912.1
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
  
 
 0.564
SCL58557.1
Hypothetical protein.
 
     0.540
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
Server load: low (24%) [HD]