STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL58728.1Raffinose/stachyose/melibiose transport system permease protein. (318 aa)    
Predicted Functional Partners:
SCL58725.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
 
  0.997
SCL58731.1
Raffinose/stachyose/melibiose transport system permease protein.
  0.992
SCL64692.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  0.970
SCL58756.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  
 
0.966
SCL58646.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  0.964
SCL47679.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.963
SCL57884.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.961
SCL57962.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.961
SCL58745.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.960
SCL54909.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.953
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.