STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL58737.1Beta-glucosidase. (470 aa)    
Predicted Functional Partners:
SCL58733.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
  
 0.892
SCL58728.1
Raffinose/stachyose/melibiose transport system permease protein.
  
    0.790
SCL58731.1
Raffinose/stachyose/melibiose transport system permease protein.
       0.789
SCL58014.1
Endoglucanase.
    
 0.786
SCL65325.1
Endoglucanase.
    
 0.726
SCL58604.1
Broad-specificity cellobiase.
  
  
 
0.696
SCL60356.1
Beta-glucosidase.
  
  
 
0.692
SCL52279.1
Broad-specificity cellobiase.
  
  
 
0.682
SCL56188.1
Exo-1,4-beta-glucosidase.
    
 0.680
SCL49309.1
Alpha-glucosidase.
  
 
  0.678
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.