STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL58891.1MoxR-like ATPase. (394 aa)    
Predicted Functional Partners:
SCL58887.1
Protein of unknown function DUF58.
  
 0.947
SCL58882.1
Ca-activated chloride channel family protein.
 
     0.912
SCL51218.1
Erythromycin resistance leader peptide.
  
 0.778
SCL51221.1
Ca-activated chloride channel family protein.
 
 
 0.677
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
 0.597
SCL58877.1
3-oxoacyl-[acyl-carrier protein] reductase.
       0.532
SCL58872.1
Enoyl-[acyl-carrier-protein] reductase [NADH].
       0.507
SCL58583.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
  
 0.431
SCL59607.1
Transglutaminase-like superfamily protein.
 
     0.426
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.