STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL59270.1Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family. (236 aa)    
Predicted Functional Partners:
SCL59276.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SCL59279.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.997
SCL59273.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 
0.992
SCL59282.1
Branched-chain amino acid transport system substrate-binding protein.
 
 
 0.979
SCL63262.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.929
SCL45860.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.917
SCL46730.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.823
SCL46951.1
Signal transduction histidine kinase.
    
 0.673
SCL51157.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
  
 
 0.629
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.592
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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