STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL59305.1aromatic-L-amino-acid decarboxylase. (476 aa)    
Predicted Functional Partners:
SCL59368.1
Glutamate synthase (NADH) large subunit.
     
 0.791
SCL56060.1
Thioesterase domain-containing protein.
  
 
 0.742
SCL48058.1
Amino acid adenylation domain-containing protein/natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
  
 
 0.736
SCL56026.1
Phosphopantetheine attachment site.
  
 
 0.736
SCL54525.1
Acyl transferase domain-containing protein.
   
 
 0.709
SCL57353.1
Tryptophan 2,3-dioxygenase; Manually curated.
  
  
  0.709
SCL58046.1
Acyl transferase domain-containing protein.
   
 
 0.709
SCL55430.1
Acyl transferase domain-containing protein.
     
 0.681
SCL50405.1
Histidine ammonia-lyase.
     
 0.626
SCL60908.1
Taurine---2-oxoglutarate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.612
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
Server load: low (34%) [HD]