STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL59660.1Acetyltransferase (GNAT) family protein. (183 aa)    
Predicted Functional Partners:
SCL59664.1
Putative membrane protein.
 
   
 0.876
SCL59657.1
Spheroidene monooxygenase.
     
 0.830
SCL59667.1
Glycosyltransferase like family 2.
     
 0.756
SCL59773.1
Protein of unknown function; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.744
SCL52034.1
Protein of unknown function.
  
     0.739
SCL59671.1
Phytoene desaturase.
     
 0.729
SCL63074.1
Hypothetical protein.
  
     0.703
SCL62990.1
Chorismate mutase.
  
     0.697
SCL46605.1
Uncharacterized conserved protein, DUF1778 family.
   
   0.663
SCL50053.1
Hypothetical protein.
  
     0.657
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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